Yohn CT, Jiang Z, McGrath SD, Hayden KE, Khaitovich P, Johnson ME, Eichler MY, McPherson JD, Zhao S, Pääbo S, Eichler EE. (2005). Lineage-specific expansions of retroviral insertions within the genomes of African great apes but not humans and orangutans. PLoS Biol Apr;3(4):e110.
Blog Archives
Molecular evolution of the human chromosome 15 pericentromeric region
Locke DP, Jiang Z, Pertz LM, Misceo D, Archidiacono N, Eichler EE. (2005). Molecular evolution of the human chromosome 15 pericentromeric region. Cytogenet Genome Res
108(1-3):73-82.
Chromosome evolution in eukaryotes: A multi-kingdom perspective
Coghlan A, Eichler EE, Oliver SG, Paterson AH, Stein L. (2005). Chromosome evolution in eukaryotes: A multi-kingdom perspective. Trends Genet Dec;21(12):673-682.
A genome-wide survey of structural variation between human and chimpanzee
Newman TL, Tüzün E, Morrison VA, Hayden KE, Ventura M, McGrath SD, Rocchi M, Eichler EE. (2005). A genome-wide survey of structural variation between human and chimpanzee. Genome Res Oct;15(10):1344-1356.
A genome-wide comparison of recent chimpanzee and human segmental duplications
Cheng Z, Ventura M, She X, Khaitovich P, Graves T, Osoegawa K, Church D, DeJong P, Wilson RK, Pääbo S, Rocchi M, Eichler EE. (2005). A genome-wide comparison of recent chimpanzee and human segmental duplications. Nature Sep;437(7055):88-93.
Initial sequencing of the chimpanzee genome and comparison with the human genome
Chimpanzee Sequencing and Analysis Consortium. (2005). Initial sequencing of the chimpanzee genome and comparison with the human genome. Nature Sep 1;437(7055):69-87. *Contributors Tüzün E, Cheng Z, Eichler EE to segmental duplication and structural variation analyses of the manuscript, pages 73-75.
Segmental duplications and copy-number variation in the human genome
Sharp AJ, Locke DP, McGrath SD, Cheng Z, Bailey JA, Samonte RU, Pertz LM, Clark R, Schwartz S, Segraves R, Oseroff VV, Albertson DG, Pinkel D, Eichler EE. (2005). Segmental duplications and copy-number variation in the human genome. Am J Hum Genet Jul;77(1):78-88.
Punctuated duplication seeding events during the evolution of human chromosome 2p11
Horvath JE, Gulden CL, Samonte RU, Eichler MY, Ventura M, McPherson JD, Graves TA, Wilson RK, Scwartz S, Rocchi M, Eichler EE. (2005). Punctuated duplication seeding events during the evolution of human chromosome 2p11.Genome Res Jul;15(7):914-927.
Manipulating multiple sequence alignments via MaM and WebMaM
Alkan C, Tüzün E, Buard J, Lethiec F, Eichler EE, Bailey JA, Sahinalp SC. (2005). Manipulating multiple sequence alignments via MaM and WebMaM. Nucleic Acids Res Jul
1;33(Web Server issue):W295-298.
Fine-scale structural variation of the human genome
Tüzün E, Sharp AJ, Bailey JA, Kaul R, Morrison VA, Pertz LM, Haugen E, Hayden H, Albertson D, Pinkel D, Olson MV, Eichler EE. (2005). Fine-scale structural variation of the human genome. Nat Genet Jul;37(7):727-732.
Generation and annotation of the DNA sequences of human chromosomes 2 and 4
Hillier LW, Graves TA, Fulton RS, Fulton LA, (110 Authors), Furey TS, Miller W, Eichler EE, Bork P, Suyama M, Torrents D, Waterston RH, Wilson RK. (2005). Generation and annotation of the DNA sequences of human chromosomes 2 and 4. Nature Apr 7;434(7034):724-731.
Interchromosomal segmental duplications of the pericentromeric region on the human Y chromosome
Kirsch S, Weiss B, Miner TL, Waterston RH, Clark RA, Eichler EE, Münch C, Schempp W, Rappold G. (2005). Interchromosomal segmental duplications of the pericentromeric region on the human Y chromosome. Genome Res Feb;15(2):195-204.
