Cardone MF, Alonso A, Pazienza M, Ventura M, Montemurro G, Carbone L, de Jong PJ, Stanyon R, D’Addabbo P, Archidiacono N, She X, Eichler EE, Warburton PE, Rocchi M. (2006). Independent centromere formation in a capricious, gene-free domain of chromosome 13q21 in Old World monkeys and pigs. Genome Biol 7(10):R91.
Blog Archives
Recurrent duplication-driven transposition of DNA during hominoid evolution
Johnson ME, NISC Comparative Sequencing Program, Cheng Z, Morrison AV, Scherer S, Ventura M, Gibbs RA, Green ED, Eichler EE. (2006). Recurrent duplication-driven transposition of DNA during hominoid evolution. Proc Natl Acad Sci U S A Nov;103(47):17626-17631.
Discovery of previously unidentified genomic disorders from the duplication architecture of the human genome
Sharp AJ, Hansen S, Selzer RR, Cheng Z, Regan R, Hurst JA, Stewart H, Price SM, Blair E, Hennekam RC, Fitzpatrick CA, Segraves R, Richmond TA, Guiver C, Albertson DG, Pinkel D, Eis PS, Schwartz S, Knight SJ, Eichler EE. (2006). Discovery of previously unidentified genomic disorders from the duplication architecture of the human genome. Nat Genet Sep;38(9):1038-1042.
Linkage disequilibrium and heritability of copy-number polymorphisms within duplicated regions of the human genome
Locke DP, Sharp AJ, McCarroll SA, McGrath SD, Newman TL, Cheng Z, Schwartz S, Albertson DG, Pinkel D, Altshuler DM, Eichler EE. (2006). Linkage disequilibrium and heritability of copy-number polymorphisms within duplicated regions of the human genome. Am J Hum Genet Aug;79(2):275-290.
Primate segmental duplications: Crucibles of evolution, diversity and disease
Bailey JA, Eichler EE. (2006). Primate segmental duplications: Crucibles of evolution, diversity and disease. Nat Rev Genet Jul;7(7):552-564.
A preliminary comparative analysis of primate segmental duplications shows elevated substitution rates and a great-ape expansion of intrachromosomal duplications
She X, Liu G, Ventura M, Zhao S, Misceo D, Roberto R, Cardone MF, Rocchi M, NISC Comparative Sequencing Program, Green ED, Archidiacano N, Eichler EE. (2006). A preliminary comparative analysis of primate segmental duplications shows elevated substitution rates and a great-ape expansion of intrachromosomal duplications. Genome Res May;16(5):576-583.
Hotspots for copy number variation in chimpanzees and humans
Perry GH, Tchinda J, McGrath SD, Zhang J, Picker SR, Cáceres AM, Iafrate AJ, Tyler-Smith C, Scherer SW, Eichler EE, Stone AC, Lee C. (2006). Hotspots for copy number variation in
chimpanzees and humans. Proc Natl Acad Sci U S A May;103(21):8006-8011.
High-throughput genotyping of intermediate-size structural variation
Newman TL, Rieder MJ, Morrison VA, Sharp AJ, Smith JD, Sprague LJ, Kaul R, Carlson CS, Olson MV, Nickerson DA, Eichler EE. (2006). High-throughput genotyping of intermediate-size structural variation. Hum Mol Genet Apr;15(7):1159-1167.
Human chromosome 11 DNA sequence and analysis including novel gene identification
Taylor TD, Noguchi H, Totoki Y, Toyoda A, Kuroki Y, Dewar K, Lloyd C, Itoh T, Takeda T, Kim DW, She X, Barlow KF, Bloom T, Bruford E, Chang JL, Cuomo CA, Eichler EE, FitzGerald MG, Jaffe DB, LaButti K, Nicol R, Park HS, Seaman C, Sougnez C, Yang X, Zimmer AR, Zody MC, Birren BW, Nusbaum C, Fujiyama A, Hattori M, Rogers J, Lander ES, Sakaki Y. (2006). Human chromosome 11 DNA sequence and analysis including novel gene identification. Nature Mar;440(7083):497-500.
Analysis of the DNA sequence and duplication history of human chromosome 15
Zody MC, Garber M, Sharpe T, Young SK, Rowen L, O’Neill K, Whittaker CA, Kamal M, Chang JL, Cuomo CA, Dewar K, FitzGerald MG, Kodira CD, Madan A, Qin S, Yang X, Abbasi N, Abouelleil A, Arachchi HM, Baradarani L, Birditt B, Bloom S, Bloom T, Borowsky ML, Burke J, Butler J, Cook A, DeArellano K, DeCaprio D, Dorris L 3rd, Dors M, Eichler EE, Engels R, Fahey J, Fleetwood P, Friedman C, Gearin G, Hall JL, Hensley G, Johnson E, Jones C, Kamat A, Kaur A, Locke DP, Madan A, Munson G, Jaffe DB, Lui A, Macdonald P, Mauceli E, Naylor JW, Nesbitt R, Nicol R, O’Leary SB, Ratcliffe A, Rounsley S, She X, Sneddon KM, Stewart S, Sougnez C, Stone SM, Topham K, Vincent D, Wang S, Zimmer AR, Birren BW, Hood L, Lander ES, Nusbaum C. (2006). Analysis of the DNA sequence and duplication history of human chromosome 15. Nature Mar;440(7084):671-675.
Widening the spectrum of human genetic variation
Eichler EE. (2006). Widening the spectrum of human genetic variation. Nat Genet Jan;38(1):9-11.
Structural variation of the human genome
Sharp AJ, Cheng Z, Eichler EE. (2006). Structural variation of the human genome. Annu Rev Genomics Hum Genet 7:407-442.